P16356

DNA-directed RNA polymerase II subunit RPB1    //   UniProt Profile 

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Species

 C. elegans

Number of Interactions

 4 / 4

Average Interaction Score

 0.948

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nucleus (GO:0005634) 1 Experimental: experimental eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Nucleus (GO:0005634) 1 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus DNA-directed RNA polymerase II, core complex (GO:0005665) 1 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Chromosome (GO:0005694) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Transcriptionally active chromatin (GO:0035327) 1 Experimental: inferred from direct assay GO PubMed 

First-Neighbour Network Visualization

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The first-neighbour network shows the interaction map after the filtration (if there was any).
Edge-widths are proportional to the respective Interaction Score.


Interactions

All Details

P16356

Interaction Score
0.973

Q9N337

(UniProtKB/Swiss-Prot/P) Details

Mediator of RNA polymerase II transcription subunit 6

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.973 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Srb-mediator complex (GO:0016592) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Core mediator complex (GO:0070847) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

P16356

Interaction Score
0.973

Q95Q17

(UniProtKB/Swiss-Prot/P) Details

Mediator of RNA polymerase II transcription subunit 7

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Mitochondrion Mitochondrion (GO:0005739) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.973 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Srb-mediator complex (GO:0016592) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Core mediator complex (GO:0070847) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

P16356

Interaction Score
0.937

P45966

(UniProtKB/Swiss-Prot/P) Details

Mediator of RNA polymerase II transcription subunit 10

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.91 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.91 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nucleus (GO:0005634) 0.937 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Srb-mediator complex (GO:0016592) 0.937 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Core mediator complex (GO:0070847) 0.937 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

P16356

Interaction Score
0.91

Q6BER6

(UniProtKB/Swiss-Prot/P) Details

Mediator of RNA polymerase II transcription subunit 21

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.91 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Srb-mediator complex (GO:0016592) 0.91 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

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ComPPI is published in Nucleic Acids Research Database Issue 2015