P34659

Probable small nuclear ribonucleoprotein F    //   UniProt Profile 

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Species

 C. elegans

Number of Interactions

 6 / 6

Average Interaction Score

 0.717

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Small nucleolar ribonucleoprotein complex (GO:0005732) 0.79 Unknown: inferred from electronic annotation GO PubMed 
Cytosol U1 snRNP (GO:0005685) 0.79 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.982 Experimental: experimental eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.982 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Catalytic step 2 spliceosome (GO:0071013) 0.982 Predicted: inferred from biological aspect of ancestor GO PubMed 

First-Neighbour Network Visualization

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The first-neighbour network shows the interaction map after the filtration (if there was any).
Edge-widths are proportional to the respective Interaction Score.


Interactions

All Details

P34659

Interaction Score
0.996

Q9XUB3

(UniProtKB/Swiss-Prot/P) Details

Meiotic recombination protein rec-8

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.958 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.958 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Nucleus (GO:0005634) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Nucleus (GO:0005634) 1 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nucleoplasm (GO:0005654) 1 Experimental: inferred from direct assay GO PubMed 
Cytosol Spindle microtubule (GO:0005876) 0.958 Experimental: inferred from direct assay GO PubMed 
Nucleus Chromosome (GO:0005694) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Condensed nuclear chromosome (GO:0000794) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Nuclear chromatin (GO:0000790) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Synaptonemal complex (GO:0000795) 1 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

BioGRID, DIP, IntAct

Interaction Source Publication:

PubMed 

P34659

Interaction Score
0.995

Q18786

(UniProtKB/Swiss-Prot/P) Details

Probable small nuclear ribonucleoprotein Sm D2

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol U1 snRNP (GO:0005685) 0.992 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol U2 snRNP (GO:0005686) 0.992 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol U4/U6 x U5 tri-snRNP complex (GO:0046540) 0.992 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol U5 snRNP (GO:0005682) 0.992 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.995 Experimental: experimental eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.995 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Precatalytic spliceosome (GO:0071011) 0.995 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Catalytic step 2 spliceosome (GO:0071013) 0.995 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

CCSB, BioGRID, DIP, IntAct

Interaction Source Publication:

PubMed , PubMed 

P34659

Interaction Score
0.992

Q9XTU6

(UniProtKB/Swiss-Prot/P) Details

Probable small nuclear ribonucleoprotein E

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol P granule (GO:0043186) 1 Experimental: inferred from direct assay GO PubMed 
Cytosol U1 snRNP (GO:0005685) 1 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol U2 snRNP (GO:0005686) 1 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol U4 snRNP (GO:0005687) 1 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol U4/U6 x U5 tri-snRNP complex (GO:0046540) 1 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol U5 snRNP (GO:0005682) 1 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.982 Experimental: experimental eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.982 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Precatalytic spliceosome (GO:0071011) 0.982 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

CCSB, IntAct

Interaction Source Publication:

PubMed , PubMed 

P34659

Interaction Score
0.769

Q20393

(UniProtKB/TrEmbl/P) Details

GIPC (RGS-GAIP Interacting Protein C) homolog

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.973 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.973 Predicted: PAML algorithm PA-GOSUB PubMed 
Cytosol Vesicle (GO:0031982) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

P34659

Interaction Score
0.553

Q9GYQ8

(UniProtKB/TrEmbl/P) Details

Uncharacterized protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Cytosol U7 snRNP (GO:0005683) 0.7 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

CCSB

Interaction Source Publication:

PubMed 

P34659

Interaction Score
0

Q20772

(UniProtKB/Swiss-Prot/P) Details

Probable glutaryl-CoA dehydrogenase, mitochondrial

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Mitochondrion Mitochondrion (GO:0005739) 0.958 Experimental: experimental eSLDB PubMed 
Mitochondrion Mitochondrion (GO:0005739) 0.958 Predicted: PAML algorithm PA-GOSUB PubMed 
Mitochondrion Mitochondrial matrix (GO:0005759) 0.958 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

BioGRID, DIP, IntAct

Interaction Source Publication:

PubMed 

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ComPPI is published in Nucleic Acids Research Database Issue 2015