P53016

Replication factor C subunit 4    //   UniProt Profile 

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Species

 C. elegans

Number of Interactions

 7 / 7

Average Interaction Score

 0.75

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nucleus (GO:0005634) 0.995 Experimental: experimental eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.995 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.995 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus DNA replication factor C complex (GO:0005663) 0.995 Predicted: inferred from biological aspect of ancestor GO PubMed 

First-Neighbour Network Visualization

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The first-neighbour network shows the interaction map after the filtration (if there was any).
Edge-widths are proportional to the respective Interaction Score.


Interactions

All Details

P53016

Interaction Score
0.989

P34429

(UniProtKB/Swiss-Prot/P) Details

Probable replication factor C subunit 5

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nucleus (GO:0005634) 0.995 Experimental: experimental eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.995 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.995 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus DNA replication factor C complex (GO:0005663) 0.995 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct, BioGRID

Interaction Source Publication:

PubMed , PubMed 

P53016

Interaction Score
0.968

Q18547

(UniProtKB/TrEmbl/P) Details

RFC (DNA replication factor) family

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.973 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus DNA replication factor C complex (GO:0005663) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

CCSB, BioGRID, IntAct, DIP

Interaction Source Publication:

PubMed , PubMed 

P53016

Interaction Score
0.968

Q21374

(UniProtKB/TrEmbl/P) Details

Uncharacterized protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nucleus (GO:0005634) 0.973 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.973 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

CCSB, IntAct, BioGRID, DIP

Interaction Source Publication:

PubMed , PubMed 

P53016

Interaction Score
0.932

Q18841

(UniProtKB/TrEmbl/P) Details

Replication factor C subunit 1

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.937 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.937 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus DNA replication factor C complex (GO:0005663) 0.937 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

CCSB, IntAct, BioGRID

Interaction Source Publication:

PubMed , PubMed , PubMed 

P53016

Interaction Score
0.696

Q22253

(UniProtKB/TrEmbl/P) Details

Proteasome Regulatory Particle, Non-ATPase-like

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.992 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytosol (GO:0005829) 0.992 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol Proteasome regulatory particle (GO:0005838) 0.992 Predicted: inferred from sequence or structural similarity GO PubMed 
Cytosol Proteasome regulatory particle, lid subcomplex (GO:0008541) 0.992 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.7 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

BioGRID, IntAct

Interaction Source Publication:

PubMed , PubMed 

P53016

Interaction Score
0.696

G5EGG2

(UniProtKB/TrEmbl/P) Details

Homolog of S. Pombe Rad

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nuclear chromatin (GO:0000790) 0.7 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct, BioGRID

Interaction Source Publication:

PubMed , PubMed 

P53016

Interaction Score
0

O18246

(UniProtKB/TrEmbl/P) Details

Uncharacterized protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.91 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol Cytoplasm (GO:0005737) 0.91 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

DIP, BioGRID, IntAct, CCSB

Interaction Source Publication:

PubMed , PubMed 

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ComPPI is published in Nucleic Acids Research Database Issue 2015