Q09584

RNP (RRM RNA binding domain) containing    //   UniProt Profile 

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Species

 C. elegans

Number of Interactions

 5 / 6

Average Interaction Score

 0.655

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.91 Predicted: SVM decision tree eSLDB PubMed 
Cytosol U1 snRNP (GO:0005685) 0.91 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.992 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Precatalytic spliceosome (GO:0071011) 0.992 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus U2-type prespliceosome (GO:0071004) 0.992 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Commitment complex (GO:0000243) 0.992 Predicted: inferred from biological aspect of ancestor GO PubMed 

First-Neighbour Network Visualization

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Edge-widths are proportional to the respective Interaction Score.


Interactions

All Details

Q09584

Interaction Score
0.98

Q18409

(UniProtKB/Swiss-Prot/P) Details

Probable splicing factor, arginine/serine-rich 6

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nucleus (GO:0005634) 0.988 Experimental: experimental eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.988 Experimental: inferred from direct assay GO PubMed 
Nucleus Nucleus (GO:0005634) 0.988 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

BioGRID, DIP, IntAct

Interaction Source Publication:

PubMed 

Q09584

Interaction Score
0.874

G5ED84

(UniProtKB/Swiss-Prot/P) Details

Kelch-like protein 8

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cul3-RING ubiquitin ligase complex (GO:0031463) 0.96 Experimental: inferred from direct assay GO PubMed 
Cytosol Neuronal cell body (GO:0043025) 0.96 Experimental: inferred from direct assay GO PubMed 
Membrane Neuron projection (GO:0043005) 0.972 Experimental: inferred from direct assay GO PubMed 
Membrane Postsynaptic density (GO:0014069) 0.972 Experimental: inferred from direct assay GO PubMed 
Membrane Cell junction (GO:0030054) 0.972 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q09584

Interaction Score
0.784

Q09615

(UniProtKB/TrEmbl/P) Details

DNA repair protein REV1

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Mitochondrion Mitochondrion (GO:0005739) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.79 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Nucleus (GO:0005634) 0.79 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

CCSB, BioGRID, IntAct

Interaction Source Publication:

PubMed , PubMed , PubMed 

Q09584

Interaction Score
0.637

O61900

(UniProtKB/TrEmbl/P) Details

Uncharacterized protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: SVM decision tree eSLDB PubMed 

Interaction Source Database:

BioGRID

Interaction Source Publication:

PubMed 

Q09584

Interaction Score
0

G5EGG0

(UniProtKB/TrEmbl/P) Details

USO1 (Yeast transport protein) homolog

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Endoplasmic reticulum (GO:0005783) 0.981 Predicted: inferred from biological aspect of ancestor GO PubMed 
Secretory-pathway Golgi membrane (GO:0000139) 0.981 Unknown: inferred from electronic annotation GO PubMed 
Secretory-pathway Golgi stack (GO:0005795) 0.981 Predicted: inferred from biological aspect of ancestor GO PubMed 
Secretory-pathway ER to Golgi transport vesicle membrane (GO:0012507) 0.981 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

BioGRID, IntAct

Interaction Source Publication:

PubMed 

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ComPPI is published in Nucleic Acids Research Database Issue 2015