Q19555

Cohesin subunit scc-3    //   UniProt Profile 

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Species

 C. elegans

Number of Interactions

 3 / 3

Average Interaction Score

 0.963

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.997 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Nucleus (GO:0005634) 0.997 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Chromatin (GO:0000785) 0.997 Experimental: inferred from direct assay GO PubMed 
Nucleus Cohesin complex (GO:0008278) 0.997 Predicted: inferred from physical interaction GO PubMed 
Nucleus Condensed chromosome (GO:0000793) 0.997 Experimental: inferred from direct assay GO PubMed 

First-Neighbour Network Visualization

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The first-neighbour network shows the interaction map after the filtration (if there was any).
Edge-widths are proportional to the respective Interaction Score.


Interactions

All Details

Q19555

Interaction Score
0.999

Q9XUB3

(UniProtKB/Swiss-Prot/P) Details

Meiotic recombination protein rec-8

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.958 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.958 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Nucleus (GO:0005634) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Nucleus (GO:0005634) 1 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nucleoplasm (GO:0005654) 1 Experimental: inferred from direct assay GO PubMed 
Cytosol Spindle microtubule (GO:0005876) 0.958 Experimental: inferred from direct assay GO PubMed 
Nucleus Chromosome (GO:0005694) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Condensed nuclear chromosome (GO:0000794) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Nuclear chromatin (GO:0000790) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Synaptonemal complex (GO:0000795) 1 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

CCSB, BioGRID, DIP, IntAct

Interaction Source Publication:

PubMed , PubMed 

Q19555

Interaction Score
0.994

Q19325

(UniProtKB/Swiss-Prot/P) Details

Sister chromatid cohesion protein 1

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.3 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Nucleus (GO:0005634) 0.995 Experimental: inferred from direct assay GO PubMed 
Nucleus Nucleus (GO:0005634) 0.995 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nuclear cohesin complex (GO:0000798) 0.995 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Cohesin complex (GO:0008278) 0.995 Predicted: inferred from physical interaction GO PubMed 

Interaction Source Database:

CCSB, BioGRID, DIP, IntAct

Interaction Source Publication:

PubMed , PubMed 

Q19555

Interaction Score
0.897

G5EBM1

(UniProtKB/Swiss-Prot/P) Details

Caspase A

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Germ cell nucleus (GO:0043073) 0.8 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

BioGRID, IntAct

Interaction Source Publication:

PubMed 

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ComPPI is published in Nucleic Acids Research Database Issue 2015