Q20060

Structural maintenance of chromosomes protein 4    //   UniProt Profile 

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Species

 C. elegans

Number of Interactions

 7 / 7

Average Interaction Score

 0.797

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.8 Experimental: experimental eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.998 Experimental: experimental eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.998 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Nucleus (GO:0005634) 0.998 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Chromosome, centromeric region (GO:0000775) 0.998 Experimental: inferred from direct assay GO PubMed 
Nucleus Condensed chromosome (GO:0000793) 0.998 Experimental: inferred from direct assay GO PubMed 

First-Neighbour Network Visualization

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The first-neighbour network shows the interaction map after the filtration (if there was any).
Edge-widths are proportional to the respective Interaction Score.


Interactions

All Details

Q20060

Interaction Score
0.999

Q9U2M1

(UniProtKB/Swiss-Prot/P) Details

Condensin complex subunit 1

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Nucleus (GO:0005634) 1 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Germ cell nucleus (GO:0043073) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Nucleoplasm (GO:0005654) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Condensed nuclear chromosome (GO:0000794) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Condensed chromosome, centromeric region (GO:0000779) 1 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Dosage compensation complex (GO:0046536) 1 Predicted: inferred from physical interaction GO PubMed 
Nucleus Nuclear condensin complex (GO:0000799) 1 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus X chromosome (GO:0000805) 1 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q20060

Interaction Score
0.998

Q95Y84

(UniProtKB/TrEmbl/P) Details

HoloCentric chromosome binding Protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nucleus (GO:0005634) 1 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 1 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nucleoplasm (GO:0005654) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Condensed chromosome, centromeric region (GO:0000779) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Condensed chromosome (GO:0000793) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Condensin complex (GO:0000796) 1 Predicted: inferred from sequence or structural similarity GO PubMed 
Nucleus Nuclear condensin complex (GO:0000799) 1 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q20060

Interaction Score
0.998

Q09591

(UniProtKB/Swiss-Prot/P) Details

Mitotic chromosome and X-chromosome-associated protein mix-1

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nucleus (GO:0005634) 0.999 Experimental: experimental eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.999 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Chromosome, centromeric region (GO:0000775) 0.999 Experimental: inferred from direct assay GO PubMed 
Nucleus Dosage compensation complex (GO:0046536) 0.999 Predicted: inferred from physical interaction GO PubMed 
Nucleus Condensed chromosome (GO:0000793) 0.999 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q20060

Interaction Score
0.986

G5EGE9

(UniProtKB/Swiss-Prot/P) Details

Condensin complex subunit dpy-26

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nuclear chromosome (GO:0000228) 0.988 Experimental: inferred from direct assay GO PubMed 
Nucleus Condensed nuclear chromosome (GO:0000794) 0.988 Experimental: inferred from direct assay GO PubMed 
Nucleus Dosage compensation complex (GO:0046536) 0.988 Predicted: inferred from physical interaction GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q20060

Interaction Score
0.789

G5EFJ4

(UniProtKB/Swiss-Prot/P) Details

Condensin complex subunit capg-1

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Dosage compensation complex (GO:0046536) 0.79 Predicted: inferred from physical interaction GO PubMed 
Nucleus Condensin complex (GO:0000796) 0.79 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q20060

Interaction Score
0.509

P34341

(UniProtKB/Swiss-Prot/P) Details

Condensin-2 complex subunit kle-2

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
N/A Cellular component (GO:0005575) 0.3 Unknown: no biological data available GO PubMed 
Nucleus Nucleus (GO:0005634) 0.51 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Chromosome, centromeric region (GO:0000775) 0.51 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q20060

Interaction Score
0.299

Q20818

(UniProtKB/TrEmbl/P) Details

CAP-G condensin subunit

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Mitochondrion Mitochondrion (GO:0005739) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.3 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

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ComPPI is published in Nucleic Acids Research Database Issue 2015