Q86NH1

Rho GTPase-activating protein syd-1    //   UniProt Profile 

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Species

 C. elegans

Number of Interactions

 10 / 12

Average Interaction Score

 0.753

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.973 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol Cytoplasm (GO:0005737) 0.973 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nucleus (GO:0005634) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Membrane Neuron projection (GO:0043005) 0.98 Unknown: inferred from electronic annotation GO PubMed 
Membrane Cell junction (GO:0030054) 0.98 Unknown: inferred from electronic annotation GO PubMed 
Membrane Synapse (GO:0045202) 0.98 Experimental: inferred from direct assay GO PubMed 
Membrane Presynaptic membrane (GO:0042734) 0.98 Experimental: inferred from direct assay GO PubMed 

First-Neighbour Network Visualization

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The first-neighbour network shows the interaction map after the filtration (if there was any).
Edge-widths are proportional to the respective Interaction Score.


Interactions

All Details

Q86NH1

Interaction Score
0.992

G5ECG0

(UniProtKB/Swiss-Prot/P) Details

Transforming acid coiled-coil-containing protein 1

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Perikaryon (GO:0043204) 0.999 Unknown: inferred from electronic annotation GO PubMed 
Cytosol Cytoplasm (GO:0005737) 0.999 Experimental: inferred from direct assay GO PubMed 
Cytosol Spindle (GO:0005819) 0.999 Experimental: inferred from direct assay GO PubMed 
Cytosol Spindle pole (GO:0000922) 0.999 Experimental: inferred from direct assay GO PubMed 
Cytosol Centrosome (GO:0005813) 0.999 Experimental: inferred from direct assay GO PubMed 
Cytosol Microtubule (GO:0005874) 0.999 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Condensed chromosome kinetochore (GO:0000777) 0.86 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Kinetochore (GO:0000776) 0.86 Experimental: inferred from direct assay GO PubMed 
Membrane Axon (GO:0030424) 0.3 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q86NH1

Interaction Score
0.965

G5EE56

(UniProtKB/Swiss-Prot/P) Details

Tyrosine protein-kinase src-1

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Contractile fiber (GO:0043292) 0.8 Experimental: inferred from direct assay GO PubMed 
Membrane Cell projection (GO:0042995) 0.86 Unknown: inferred from electronic annotation GO PubMed 
Membrane Phagocytic cup (GO:0001891) 0.86 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q86NH1

Interaction Score
0.955

Q9N2Z7

(UniProtKB/TrEmbl/P) Details

E3 ubiquitin-protein ligase

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.982 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.982 Experimental: inferred from direct assay GO PubMed 
Cytosol Cytoplasm (GO:0005737) 0.982 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

CCSB, IntAct

Interaction Source Publication:

PubMed 

Q86NH1

Interaction Score
0.902

H2L0I2

(UniProtKB/TrEmbl/P) Details

Lin-5 (Five) Interacting protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nucleus (GO:0005634) 0.8 Experimental: inferred from direct assay GO PubMed 
Cytosol Kinetochore microtubule (GO:0005828) 0.8 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q86NH1

Interaction Score
0.837

O44820

(UniProtKB/TrEmbl/P) Details

Uncharacterized protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.7 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q86NH1

Interaction Score
0.837

Q18776

(UniProtKB/TrEmbl/P) Details

INSOmniac (Drosophila sleep affecting) homolog

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.79 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Striated muscle dense body (GO:0055120) 0.79 Unknown: HDA GO PubMed 
Membrane Cell junction (GO:0030054) 0.3 Unknown: HDA GO PubMed 

Interaction Source Database:

CCSB, IntAct

Interaction Source Publication:

PubMed 

Q86NH1

Interaction Score
0.681

Q95XU3

(UniProtKB/TrEmbl/P) Details

E3 ubiquitin-protein ligase

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

CCSB

Interaction Source Publication:

PubMed 

Q86NH1

Interaction Score
0.681

Q45EJ8

(UniProtKB/TrEmbl/P) Details

Lin-5 (Five) Interacting protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: SVM decision tree eSLDB PubMed 

Interaction Source Database:

CCSB

Interaction Source Publication:

PubMed 

Q86NH1

Interaction Score
0.681

Q21563

(UniProtKB/TrEmbl/P) Details

Uncharacterized protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: SVM decision tree eSLDB PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q86NH1

Interaction Score
0

G5EGG0

(UniProtKB/TrEmbl/P) Details

USO1 (Yeast transport protein) homolog

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Endoplasmic reticulum (GO:0005783) 0.981 Predicted: inferred from biological aspect of ancestor GO PubMed 
Secretory-pathway Golgi membrane (GO:0000139) 0.981 Unknown: inferred from electronic annotation GO PubMed 
Secretory-pathway Golgi stack (GO:0005795) 0.981 Predicted: inferred from biological aspect of ancestor GO PubMed 
Secretory-pathway ER to Golgi transport vesicle membrane (GO:0012507) 0.981 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

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ComPPI is published in Nucleic Acids Research Database Issue 2015