Q9XW79

Serine/threonine-protein phosphatase 4 catalytic subunit 1    //   UniProt Profile 

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Species

 C. elegans

Number of Interactions

 8 / 10

Average Interaction Score

 0.637

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.996 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.996 Experimental: inferred from direct assay GO PubMed 
Cytosol Cytoplasm (GO:0005737) 0.996 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nucleus (GO:0005634) 0.7 Predicted: PAML algorithm PA-GOSUB PubMed 
Cytosol Centrosome (GO:0005813) 0.996 Experimental: inferred from direct assay GO PubMed 

First-Neighbour Network Visualization

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The first-neighbour network shows the interaction map after the filtration (if there was any).
Edge-widths are proportional to the respective Interaction Score.


Interactions

All Details

Q9XW79

Interaction Score
0.999

Q09248

(UniProtKB/Swiss-Prot/P) Details

Probable dynactin subunit 2

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 1 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 1 Experimental: inferred from direct assay GO PubMed 
Cytosol Cytoplasm (GO:0005737) 1 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nucleus (GO:0005634) 0.86 Unknown: HDA GO PubMed 
Cytosol Spindle microtubule (GO:0005876) 1 Experimental: inferred from direct assay GO PubMed 
Cytosol Dynein complex (GO:0030286) 1 Unknown: inferred from electronic annotation GO PubMed 
Cytosol Dynactin complex (GO:0005869) 1 Experimental: inferred from direct assay GO PubMed 
Cytosol Pericentriolar material (GO:0000242) 1 Experimental: inferred from direct assay GO PubMed 
Cytosol Centrosome (GO:0005813) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Kinetochore (GO:0000776) 0.86 Experimental: inferred from direct assay GO PubMed 
Membrane Membrane (GO:0016020) 0.3 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

CCSB, DIP, IntAct, BioGRID

Interaction Source Publication:

PubMed , PubMed 

Q9XW79

Interaction Score
0.967

Q19289

(UniProtKB/Swiss-Prot/P) Details

Intermediate filament protein ifb-1

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.971 Experimental: experimental eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.971 Unknown: inferred from electronic annotation GO PubMed 
Cytosol Cytoplasm (GO:0005737) 0.971 Predicted: PAML algorithm PA-GOSUB PubMed 
Cytosol Intermediate filament (GO:0005882) 0.971 Unknown: inferred from electronic annotation GO PubMed 
Membrane Apical plasma membrane (GO:0016324) 0.8 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

DIP, IntAct, BioGRID

Interaction Source Publication:

PubMed 

Q9XW79

Interaction Score
0.937

Q9NA98

(UniProtKB/TrEmbl/P) Details

Actin-Related Proteins

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.94 Predicted: PAML algorithm PA-GOSUB PubMed 
Cytosol Dynactin complex (GO:0005869) 0.94 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

IntAct, BioGRID, CCSB, DIP

Interaction Source Publication:

PubMed , PubMed 

Q9XW79

Interaction Score
0.797

Q965K5

(UniProtKB/TrEmbl/P) Details

DyNactin Complex component

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Dynactin complex (GO:0005869) 0.8 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

IntAct, BioGRID, CCSB, DIP

Interaction Source Publication:

PubMed , PubMed 

Q9XW79

Interaction Score
0.697

Q09294

(UniProtKB/Swiss-Prot/P) Details

Uncharacterized protein EEED8.3

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

IntAct, DIP, BioGRID, CCSB

Interaction Source Publication:

PubMed , PubMed 

Q9XW79

Interaction Score
0.697

Q9N4E9

(UniProtKB/Swiss-Prot/P) Details

Serine/threonine-protein phosphatase 4 regulatory subunit ppfr-4

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytosol (GO:0005829) 0.7 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct, DIP, BioGRID, CCSB

Interaction Source Publication:

PubMed , PubMed 

Q9XW79

Interaction Score
0

Q19771

(UniProtKB/TrEmbl/P) Details

Uncharacterized protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 

Interaction Source Database:

DIP, IntAct, BioGRID

Interaction Source Publication:

PubMed 

Q9XW79

Interaction Score
0

G5EE66

(UniProtKB/TrEmbl/P) Details

COGC-1

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Golgi apparatus (GO:0005794) 0.79 Predicted: inferred from biological aspect of ancestor GO PubMed 
Secretory-pathway Golgi transport complex (GO:0017119) 0.79 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

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ComPPI is published in Nucleic Acids Research Database Issue 2015