Q9N4B8

Nuclear hormone receptor family member nhr-41    //   UniProt Profile 

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Species

 C. elegans

Number of Interactions

 15 / 17

Average Interaction Score

 0.435

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Mitochondrion Mitochondrion (GO:0005739) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.79 Unknown: inferred from electronic annotation GO PubMed 
Nucleus Nucleus (GO:0005634) 0.79 Predicted: PAML algorithm PA-GOSUB PubMed 

First-Neighbour Network Visualization

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The first-neighbour network shows the interaction map after the filtration (if there was any).
Edge-widths are proportional to the respective Interaction Score.


Interactions

All Details

Q9N4B8

Interaction Score
0.769

Q18033

(UniProtKB/TrEmbl/P) Details

THO Complex (Transcription factor/nuclear export) subunit

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.973 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus THO complex (GO:0000347) 0.973 Predicted: inferred from sequence or structural similarity GO PubMed 
Nucleus THO complex part of transcription export complex (GO:0000445) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

DIP, IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0.758

O02063

(UniProtKB/TrEmbl/P) Details

Sperm Meiosis PDZ domain containing proteins

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nuclear chromatin (GO:0000790) 0.96 Experimental: inferred from direct assay GO PubMed 
Nucleus Chromatin (GO:0000785) 0.96 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0.719

Q93644

(UniProtKB/TrEmbl/P) Details

Kinase

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.91 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.91 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nucleus (GO:0005634) 0.91 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.91 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

CCSB, DIP, IntAct

Interaction Source Publication:

PubMed , PubMed 

Q9N4B8

Interaction Score
0.719

Q17573

(UniProtKB/TrEmbl/P) Details

Uncharacterized protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Nucleus Nucleus (GO:0005634) 0.91 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.91 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

DIP, IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0.719

Q10920

(UniProtKB/Swiss-Prot/P) Details

Probable 26S proteasome non-ATPase regulatory subunit 9

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.973 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol Proteasome regulatory particle, base subcomplex (GO:0008540) 0.973 Predicted: inferred from biological aspect of ancestor GO PubMed 
Nucleus Nucleus (GO:0005634) 0.91 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.91 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0.632

Q9GSX9

(UniProtKB/Swiss-Prot/P) Details

Synembryn

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 1 Experimental: experimental eSLDB PubMed 
Cytosol Cell cortex (GO:0005938) 1 Experimental: inferred from direct assay GO PubMed 
Nucleus Nucleus (GO:0005634) 0.8 Experimental: experimental eSLDB PubMed 
Cytosol Aster (GO:0005818) 1 Experimental: inferred from direct assay GO PubMed 
Cytosol Cytoskeleton (GO:0005856) 1 Experimental: experimental eSLDB PubMed 
Cytosol Spindle (GO:0005819) 1 Experimental: inferred from direct assay GO PubMed 
Cytosol Kinetochore microtubule (GO:0005828) 1 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

DIP, IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0.553

Q22227

(UniProtKB/Swiss-Prot/P) Details

Segment polarity protein dishevelled homolog mig-5

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.996 Experimental: inferred from direct assay GO PubMed 
Cytosol Cytoplasm (GO:0005737) 0.996 Predicted: PAML algorithm PA-GOSUB PubMed 
Cytosol Cytosol (GO:0005829) 0.996 Predicted: inferred from biological aspect of ancestor GO PubMed 
Cytosol Cell cortex (GO:0005938) 0.996 Experimental: inferred from direct assay GO PubMed 
Nucleus Nucleus (GO:0005634) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Membrane Plasma membrane (GO:0005886) 0.51 Unknown: inferred from electronic annotation GO PubMed 
Membrane Cell junction (GO:0030054) 0.51 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0.553

Q22366

(UniProtKB/Swiss-Prot/P) Details

Rab-3-interacting molecule unc-10

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Intracellular (GO:0005622) 0.79 Unknown: inferred from electronic annotation GO PubMed 
Cytosol Cytoplasm (GO:0005737) 0.79 Predicted: PAML algorithm PA-GOSUB PubMed 
Nucleus Nucleus (GO:0005634) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Membrane Axon (GO:0030424) 0.996 Experimental: inferred from direct assay GO PubMed 
Membrane Membrane (GO:0016020) 0.996 Unknown: inferred from electronic annotation GO PubMed 
Membrane Cell junction (GO:0030054) 0.996 Unknown: inferred from electronic annotation GO PubMed 
Membrane Synapse (GO:0045202) 0.996 Experimental: inferred from direct assay GO PubMed 
Membrane Presynaptic active zone (GO:0048786) 0.996 Experimental: inferred from direct assay GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0.553

Q17865

(UniProtKB/Swiss-Prot/P) Details

Uncharacterized protein C09G1.4

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
N/A Cellular component (GO:0005575) 0.3 Unknown: no biological data available GO PubMed 
Nucleus Nucleus (GO:0005634) 0.7 Predicted: SVM decision tree eSLDB PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0.553

Q9XVE6

(UniProtKB/TrEmbl/P) Details

RNase H

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Nucleus Nucleus (GO:0005634) 0.7 Predicted: inferred from biological aspect of ancestor GO PubMed 

Interaction Source Database:

IntAct, DIP

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0

G5EG39

(UniProtKB/TrEmbl/P) Details

SKR-10

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol SCF ubiquitin ligase complex (GO:0019005) 0.7 Predicted: inferred from physical interaction GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0

Q09236

(UniProtKB/Swiss-Prot/P) Details

Probable coatomer subunit delta

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.988 Experimental: experimental eSLDB PubMed 
Cytosol Cytoplasm (GO:0005737) 0.988 Predicted: PAML algorithm PA-GOSUB PubMed 
Secretory-pathway Golgi apparatus (GO:0005794) 0.971 Experimental: experimental eSLDB PubMed 
Secretory-pathway Golgi apparatus (GO:0005794) 0.971 Predicted: PAML algorithm PA-GOSUB PubMed 
Secretory-pathway Golgi membrane (GO:0000139) 0.971 Unknown: inferred from electronic annotation GO PubMed 
Secretory-pathway COPI vesicle coat (GO:0030126) 0.971 Unknown: inferred from electronic annotation GO PubMed 
Membrane Membrane (GO:0016020) 0.8 Experimental: experimental eSLDB PubMed 
Cytosol Vesicle (GO:0031982) 0.988 Experimental: experimental eSLDB PubMed 

Interaction Source Database:

IntAct, DIP

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0

G5ECZ8

(UniProtKB/TrEmbl/P) Details

Multiple PDZ domain protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Membrane Axon (GO:0030424) 0.86 Experimental: inferred from direct assay GO PubMed 
Membrane Integral to membrane (GO:0016021) 0.86 Unknown: inferred from electronic annotation GO PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0

Q7YWW5

(UniProtKB/TrEmbl/P) Details

Multiple PDZ domain protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Cytosol Cytoplasm (GO:0005737) 0.7 Predicted: SVM decision tree eSLDB PubMed 

Interaction Source Database:

IntAct

Interaction Source Publication:

PubMed 

Q9N4B8

Interaction Score
0

O62022

(UniProtKB/TrEmbl/P) Details

Uncharacterized protein

Localizations:

Major Localization Minor Localization Localization Score Experiment Type Source Database PubMed ID
Secretory-pathway Secretory pathway (GO:secretory_pathway) 0.7 Predicted: SVM decision tree eSLDB PubMed 
Extracellular Extracellular region (GO:0005576) 0.7 Predicted: PAML algorithm PA-GOSUB PubMed 

Interaction Source Database:

DIP, CCSB

Interaction Source Publication:

PubMed , PubMed 

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ComPPI is published in Nucleic Acids Research Database Issue 2015